STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW17861.1COGs: COG0864 transcriptional regulator protein containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; InterPro IPR014864; KEGG: dak:DaAHT2_2678 transcriptional regulator NikR, CopG family; PFAM: NikR nickel binding; SPTR: Transcriptional regulator NikR, CopG family; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR. (136 aa)    
Predicted Functional Partners:
ADW17862.1
Peptidase M48 Ste24p; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR019734: IPR001915: IPR013026; KEGG: dps:DP2629 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M48.
       0.773
ADW17863.1
FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094: IPR004113: IPR004017: IPR017896: IPR 016166: IPR017900; KEGG: afw:Anae109_2999 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: FAD linked oxidase domain protein; PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); FAD linked oxidases, C-terminal domain.
       0.503
ADW19076.1
COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143: IPR004408; KEGG: tjr:TherJR_0220 biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; PRIAM: Biotin--[acetyl-CoA-carboxylase] ligase; SPTR: Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; manually curated; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region.
     
 0.449
ADW17900.1
COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR000688; KEGG: dps:DP0582 hydrogenase accessory protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: Probable hydrogenase accessory protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA.
 
   
 0.423
ADW17901.1
Hydrogenase accessory protein HypB; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392: IPR003495: IPR012202; KEGG: dps:DP0583 hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; SPTR: Probable hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB.
 
   
 0.405
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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