STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18000.1KEGG: pca:Pcar_0938 hypothetical protein; SPTR: Putative uncharacterized protein. (452 aa)    
Predicted Functional Partners:
ADW18168.1
VacJ family lipoprotein; COGs: COG2853 Surface lipoprotein; InterPro IPR007428; KEGG: dak:DaAHT2_1297 VacJ family lipoprotein; PFAM: VacJ family lipoprotein; SPTR: VacJ-like lipoprotein; PFAM: VacJ like lipoprotein.
    
 
 0.731
ADW18329.1
TolB domain-containing protein; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR014167: IPR007195: IPR011659; KEGG: dps:DP2412 TolB protein [precursor]; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein; SPTR: Protein tolB; PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB.
    
 
 0.572
ADW16505.1
ThiJ/PfpI domain-containing protein; COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; InterPro IPR002818; KEGG: dps:DP0859 isoprenoid biosynthesis protein with amidotransferase-like domain; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: DJ-1/PfpI family.
  
     0.440
ADW18001.1
Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607; KEGG: dps:DP1401 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative uncharacterized protein; PFAM: HD domain.
       0.435
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.