STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18023.1InterPro IPR011701; KEGG: sdl:Sdel_1683 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (394 aa)    
Predicted Functional Partners:
ADW18022.1
InterPro IPR011642; KEGG: nam:NAMH_1746 transporter gate domain protein; PFAM: nucleoside recognition domain protein; SPTR: Putative uncharacterized protein.
   
   0.550
ADW18024.1
Rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR018392: IPR005132: IPR002482; KEGG: msv:Mesil_2034 rare lipoprotein A; PFAM: Rare lipoprotein A; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; LysM domain; TIGRFAM: rare lipoprotein A.
       0.504
ADW18493.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR003661: IPR003594: IPR004358: IPR 017055; KEGG: alv:Alvin_1067 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.415
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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