STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18053.1KEGG: dak:DaAHT2_1341 hypothetical protein; SPTR: Putative uncharacterized protein. (86 aa)    
Predicted Functional Partners:
ADW18052.1
Protein of unknown function DUF299; COGs: COG1806 conserved hypothetical protein; InterPro IPR005177; KEGG: dak:DaAHT2_1038 protein of unknown function DUF299; PFAM: protein of unknown function DUF299; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF299).
       0.746
ADW18054.1
COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042: IPR003953; KEGG: dak:DaAHT2_1340 HI0933 family protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: HI0933 family protein; PFAM: Thi4 family.
       0.722
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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