Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADW18096.1KEGG: dps:DP2756 hypothetical protein; SPTR: Putative uncharacterized protein. (114 aa)    
Predicted Functional Partners:
ADW18097.1
COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: dat:HRM2_23720 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156).
       0.493
ADW18098.1
Peptidase S58 DmpA; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321; KEGG: cno:NT01CX_1082 T4 family peptidase; PFAM: peptidase S58 DmpA; SPTR: Peptidase S58 DmpA; PFAM: Peptidase family S58.
       0.421
ADW18095.1
InterPro IPR017900: IPR017896; KEGG: dak:DaAHT2_1668 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S binding domain.
       0.407
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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