STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18219.1COGs: COG4970 Tfp pilus assembly protein FimT; InterPro IPR001120: IPR012902; KEGG: dol:Dole_0486 pilin assembly protein; SPTR: Pilin assembly protein; PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (176 aa)    
Predicted Functional Partners:
ADW18221.1
Na-Ca exchanger/integrin-beta4; COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR018247: IPR000209: IPR003644; KEGG: dal:Dalk_4404 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Type 4 fimbrial biogenesis protein PilY1; PFAM: Protein metal binding site; Calx-beta domain.
 
  
 0.939
ADW18223.1
Hypothetical protein; InterPro IPR001120: IPR012902; KEGG: sfu:Sfum_2553 type II secretory pathway component PulJ-like; SPTR: Type II secretory pathway component PulJ-like; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
   
 0.843
ADW18220.1
Hypothetical protein; KEGG: nvi:100117681 similar to RE11240p; SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
       0.773
ADW18224.1
Hypothetical protein; InterPro IPR001120: IPR012902; KEGG: dar:Daro_3039 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
  
 0.676
ADW19347.1
COGs: COG3167 Tfp pilus assembly protein PilO; KEGG: dps:DP0110 fimbrial assembly protein PilO; SPTR: Related to fimbrial assembly protein PilO; PFAM: Pilus assembly protein, PilO.
 
  
 0.634
ADW19348.1
COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: dps:DP0109 fimbrial assembly protein PilN; PFAM: Fimbrial assembly family protein; SPTR: Related to fimbrial assembly protein PilN; PFAM: Fimbrial assembly protein (PilN).
 
  
 0.626
ADW18222.1
KEGG: dal:Dalk_4403 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
ADW19345.1
Secretin/TonB short domain protein; InterPro IPR011662: IPR013026; KEGG: dps:DP0112 fimbrial assembly protein PilQ [precursor]; PFAM: Secretin/TonB short domain; SPTR: Related to fimbrial assembly protein PilQ [Precursor]; PFAM: Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes.
 
   
 0.506
ADW18225.1
KEGG: sce:YKL020C ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Mga2p; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting.
       0.482
ADW18226.1
Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR020441: IPR002078: IPR001789: IPR002197: IPR 003593; KEGG: dol:Dole_1777 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response reg [...]
       0.482
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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