Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADW18269.1Lytic transglycosylase catalytic; InterPro IPR008258; KEGG: mca:MCA2115 transglycosylase SLT domain-containing protein; PFAM: Lytic transglycosylase catalytic; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain. (383 aa)    
Predicted Functional Partners:
ADW17248.1
Protein of unknown function DUF330; COGs: COG3009 conserved hypothetical protein; InterPro IPR005586; KEGG: mca:MCA0364 putative lipoprotein; PFAM: protein of unknown function DUF330; SPTR: Putative lipoprotein; PFAM: Protein of unknown function (DUF330).
  
     0.697
ADW17406.1
KEGG: ppd:Ppro_0414 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
ADW18045.1
KEGG: mca:MCA0716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.578
ADW18500.1
COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR005479: IPR011206; KEGG: sfu:Sfum_2561 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate (Pro-3S)-lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family.
  
     0.572
ADW17522.1
KEGG: bbe:BBR47_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.568
ADW18268.1
COGs: COG0778 Nitroreductase; InterPro IPR017900: IPR017896: IPR000415; KEGG: dol:Dole_1688 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.529
ADW17399.1
KEGG: ppd:Ppro_0395 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.508
ADW16866.1
UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterProIPR000713: IPR013221: IPR004101: IPR005761: IPR 005863; KEGG: dps:DP2901 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimel [...]
     
 0.449
ADW18180.1
Conserved hypothetical protein CHP00730; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: cja:CJA_1346 decarboxylase family protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Decarboxylase family protein; PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase.
 
 
   0.434
ADW16217.1
Hypothetical protein; COGs: COG0421 Spermidine synthase; KEGG: mca:MCA1034 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Spermine/spermidine synthase.
 
    0.412
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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