STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18269.1Lytic transglycosylase catalytic; InterPro IPR008258; KEGG: mca:MCA2115 transglycosylase SLT domain-containing protein; PFAM: Lytic transglycosylase catalytic; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain. (383 aa)    
Predicted Functional Partners:
ADW17248.1
Protein of unknown function DUF330; COGs: COG3009 conserved hypothetical protein; InterPro IPR005586; KEGG: mca:MCA0364 putative lipoprotein; PFAM: protein of unknown function DUF330; SPTR: Putative lipoprotein; PFAM: Protein of unknown function (DUF330).
  
     0.697
ADW17406.1
KEGG: ppd:Ppro_0414 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
ADW18045.1
KEGG: mca:MCA0716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.578
ADW18500.1
COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR005479: IPR011206; KEGG: sfu:Sfum_2561 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate (Pro-3S)-lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family.
  
     0.572
ADW17522.1
KEGG: bbe:BBR47_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.566
ADW18364.1
COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.
  
  
 0.549
fliI
Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR003593: IPR000194: IPR020003: IPR005714; KEGG: dps:DP2659 flagellum-specific ATP synthase (FliI); PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; SPTR: ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family.
  
  
 0.548
ADW18268.1
COGs: COG0778 Nitroreductase; InterPro IPR017900: IPR017896: IPR000415; KEGG: dol:Dole_1688 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.529
ADW17399.1
KEGG: ppd:Ppro_0395 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.508
ADW18377.1
Surface presentation of antigens (SPOA) protein; COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: drt:Dret_0581 flagellar motor switch protein FliM; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; SPTR: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
  
    0.486
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.