STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18343.1Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (95 aa)    
Predicted Functional Partners:
ADW19098.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dps:DP0818 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Probable DNA-binding protein HU-beta; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; Belongs to the bacterial histone-like protein family.
 
 
 0.985
ADW16236.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dps:DP0900 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Probable DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
 
 
 0.984
ADW19269.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dps:DP0818 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Probable DNA-binding protein HU-beta; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit.
 
 
0.956
ADW17591.1
Regulatory protein MerR; InterPro IPR000551; KEGG: pca:Pcar_1425 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; manually curated; PFAM: MerR family regulatory protein.
  
  
 0.832
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  
 0.806
ADW17800.1
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
 
 0.802
csrA
Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
  
 
 0.759
ADW18902.1
ATP-dependent Clp protease adaptor protein ClpS; COGs: COG2127 conserved hypothetical protein; InterPro IPR003769; KEGG: dak:DaAHT2_2499 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS.
   
    0.651
rpmI
LSU ribosomal protein L35P; InterPro IPR001706: IPR021137: IPR018265; KEGG: dps:DP1426 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
  
    0.635
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
   0.587
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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