STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18425.1Transposase, IS4 family; InterPro IPR002559; KEGG: dak:DaAHT2_2599 transposase IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein; PFAM: Transposase DDE domain. (461 aa)    
Predicted Functional Partners:
ADW16846.1
Thiamine biosynthesis protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR020536; KEGG: dps:DP2965 hypothetical protein; PFAM: Thiamine biosynthesis protein-like; SPTR: Thiamine biosynthesis protein; PFAM: Thiamine biosynthesis protein (ThiI).
  
  
 0.868
ADW18424.1
Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR003593; KEGG: dma:DMR_45390 putative NtrC family two-component response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Putative NtrC family two-component response regulator; PFAM: Response regulator receiver domain; Sigma-54 interaction domain.
       0.523
ADW16716.1
Transposase, IS4 family; InterPro IPR002559; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.438
ADW16725.1
Transposase, IS4 family; InterPro IPR002559; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.438
ADW16723.1
Transposase, IS4 family; InterPro IPR002559; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4.
  
     0.437
ADW16829.1
COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR007409: IPR006935: IPR013670: IPR014001: IPR 014021: IPR001650; KEGG: pnu:Pnuc_1134 EcoEI R domain-containing protein; PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: EcoEI R, C-terminal domain protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res s [...]
  
    0.408
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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