STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18439.1Hypothetical protein; KEGG: cbt:CLH_2942 choline/ethanolamine kinase family protein; SPTR: Choline/ethanolamine kinase family protein. (80 aa)    
Predicted Functional Partners:
ADW18440.1
ANTAR domain protein with unknown sensor; COGs: COG3707 Response regulator with putative antiterminator output domain; InterPro IPR005561: IPR003018; KEGG: dal:Dalk_0523 ANTAR domain protein with unknown sensor; PFAM: GAF domain protein; ANTAR domain protein; SMART: GAF domain protein; SPTR: Putative uncharacterized protein; PFAM: GAF domain; ANTAR domain.
       0.769
ADW18441.1
Glutamate synthase (NADPH) GltB2 subunit; COGs: COG0069 Glutamate synthase domain 2; KEGG: dal:Dalk_0522 ferredoxin-dependent glutamate synthase; SPTR: Ferredoxin-dependent glutamate synthase; PFAM: Conserved region in glutamate synthase.
       0.418
ADW18438.1
COGs: COG1362 Aspartyl aminopeptidase; InterPro IPR001948: IPR020053; KEGG: cja:CJA_2082 putative aminopeptidase 2; PFAM: peptidase M18 aminopeptidase I; PRIAM: Aspartyl aminopeptidase; SPTR: M18 family aminopeptidase; PFAM: Aminopeptidase I zinc metalloprotease (M18).
       0.406
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.