STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18478.1KEGG: nfi:NFIA_050600 hypothetical protein. (51 aa)    
Predicted Functional Partners:
ADW18479.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: sus:Acid_7201 peptidase M16 domain-containing protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.686
ADW18480.1
CheW domain protein; InterPro IPR002545; KEGG: dsy:DSY2993 hypothetical protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Putative uncharacterized protein; PFAM: CheW-like domain.
       0.634
ADW18477.1
COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR003660: IPR004090; KEGG: cts:Ctha_2353 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
       0.442
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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