STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18506.1KEGG: tde:TDE1967 hypothetical protein; SPTR: Putative uncharacterized protein. (323 aa)    
Predicted Functional Partners:
ADW16492.1
KEGG: dak:DaAHT2_2292 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
ADW18507.1
Extracellular solute-binding protein family 5; COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: mgm:Mmc1_2153 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein, family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.488
ADW17224.1
YbbR family protein; InterPro IPR012505; KEGG: dps:DP1640 hypothetical protein; PFAM: YbbR family protein; SPTR: YbbR-like; PFAM: YbbR-like protein.
  
     0.425
ADW17768.1
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: dps:DP2217 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).
  
     0.420
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.