STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18519.1KEGG: bfo:BRAFLDRAFT_90440 hypothetical protein; SPTR: Putative uncharacterized protein. (464 aa)    
Predicted Functional Partners:
ADW17367.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: dal:Dalk_3692 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
   
 
 0.868
ADW17119.1
COGs: COG0101 Pseudouridylate synthase; InterPro IPR001406: IPR020097; KEGG: dak:DaAHT2_0355 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I.
  
  
 0.704
ADW16570.1
PKD domain containing protein; InterPro IPR000601; KEGG: nhl:Nhal_3293 fibronectin type III domain protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Fibronectin type III domain protein; PFAM: PKD domain; H-type lectin domain.
  
 
 
 0.701
ADW18175.1
PAS sensor protein; InterProIPR000014: IPR000700: IPR003018: IPR013656: IPR 003661: IPR001610; KEGG: dat:HRM2_42110 GGDEF domain family protein; PFAM: GAF domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: GAF domain protein; PAC repeat-containing protein; histidine kinase A domain protein; SPTR: GGDEF domain family protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
     0.696
ADW16831.1
Hypothetical protein; InterPro IPR013431; KEGG: cph:Cpha266_2335 hemolysin-type calcium-binding region; SPTR: Putative uncharacterized protein; TIGRFAM: delta-60 repeat domain.
  
 
 
 0.681
ADW17116.1
Hypothetical protein; COGs: COG0305 Replicative DNA helicase; InterPro IPR007694; KEGG: ade:Adeh_1793 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DnaB-like helicase C terminal domain.
  
     0.671
ADW17035.1
Hypothetical protein; InterPro IPR011031; KEGG: sse:Ssed_4024 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.620
ADW17538.1
InterPro IPR013429; KEGG: nhl:Nhal_3762 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family.
  
     0.620
ADW19345.1
Secretin/TonB short domain protein; InterPro IPR011662: IPR013026; KEGG: dps:DP0112 fimbrial assembly protein PilQ [precursor]; PFAM: Secretin/TonB short domain; SPTR: Related to fimbrial assembly protein PilQ [Precursor]; PFAM: Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes.
 
  
 0.613
ADW16678.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: sat:SYN_00801 esterase-like protein; PFAM: alpha/beta hydrolase fold; SPTR: Esterase-like protein; PFAM: alpha/beta hydrolase fold.
  
     0.604
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.