STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18555.1Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: dat:HRM2_17970 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase. (95 aa)    
Predicted Functional Partners:
ADW16808.1
KEGG: dat:HRM2_31840 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.578
ADW18282.1
Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: sfu:Sfum_1531 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein.
 
     0.573
ADW18556.1
Hypothetical protein; KEGG: spu:590893 similar to MGC89174 protein.
       0.563
ADW16838.1
KEGG: dat:HRM2_11340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: General secretion pathway, M protein.
  
     0.504
ADW18442.1
Transcriptional regulator, XRE family; COGs: COG0467 RecA-superfamily ATPase implicated in signal transduction; InterPro IPR001387: IPR013096; KEGG: sfu:Sfum_4068 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix.
 
   
 0.449
ADW17791.1
Cytidylate kinase, Cmk2; COGs: COG1102 Cytidylate kinase; KEGG: dat:HRM2_39230 Cmk2; SPTR: Cmk2.
  
     0.431
ADW19254.1
Protein of unknown function DUF105; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491: IPR002808; KEGG: sfu:Sfum_2743 hypothetical protein; PFAM: protein of unknown function DUF105; periplasmic binding protein; SPTR: Putative uncharacterized protein; PFAM: Periplasmic binding protein; Adenosylcobinamide amidohydrolase.
 
  
 0.421
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.