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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18612.1protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556: IPR019874: IPR002052: IPR007848; KEGG: dps:DP2725 HemK methylase; PFAM: methyltransferase small; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Related to HemK methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor- [...] (286 aa)    
Predicted Functional Partners:
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
 
 0.999
ADW17957.1
COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388: IPR006070; KEGG: dak:DaAHT2_1346 SUA5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein.
 
  
 0.902
plsX
Phosphate:acyl-(acyl carrier protein) acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
   
    0.794
atpH
ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.791
ADW16237.1
COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: dps:DP0901 hypothetical protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein.
 
  
 0.784
ADW18611.1
COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750: IPR001986; KEGG: dak:DaAHT2_0610 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
     
 0.710
ADW17432.1
ATP synthase F0 subcomplex C subunit; InterPro IPR017708: IPR005953: IPR000454: IPR002379; KEGG: nhl:Nhal_1907 alternate F1F0 ATPase, F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Strongly similar to ATPE encoding subunit c of ATP synthase; TIGRFAM: alternate F1F0 ATPase, F0 subunit C; ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; alternate F1F0 ATPase, F0 subunit C.
  
   0.705
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.705
ADW17435.1
H+transporting two-sector ATPase gamma subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: nhl:Nhal_1904 alternate F1F0 ATPase, F1 subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: ATP synthase gamma subunit-like protein; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; alternate F1F0 ATPase, F1 subunit gamma.
  
   0.661
atpG
ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
  
   0.661
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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