STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18634.1Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: dak:DaAHT2_1047 protein of unknown function UPF0027; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027. (390 aa)    
Predicted Functional Partners:
ADW17597.1
Cna B domain protein; COGs: COG3209 Rhs family protein; InterPro IPR008454: IPR001826; KEGG: ssn:SSON_1675 rhs core protein with extension; PFAM: Cna B domain protein; RHS protein; SPTR: Type VI secretion system Vgr family protein; TIGRFAM: RHS repeat-associated core domain.
  
     0.563
ADW17598.1
Cna B domain protein; COGs: COG3209 Rhs family protein; InterPro IPR008454: IPR001826; KEGG: rso:RS00908 putative RSH-related protein; PFAM: Cna B domain protein; RHS protein; SPTR: Putative rsh-related protein; manually curated; TIGRFAM: RHS repeat-associated core domain.
  
     0.548
ADW18635.1
COGs: COG3366 conserved hypothetical protein; KEGG: dba:Dbac_2421 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.532
ADW17168.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021: IPR001650: IPR014014: IPR014001: IPR 011545; KEGG: gur:Gura_1632 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
   
 0.492
ADW17624.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021: IPR001650: IPR014014: IPR011545: IPR 014001: IPR000629; KEGG: ppd:Ppro_1374 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
   
 0.492
ADW19328.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR005580: IPR014021: IPR 014014: IPR000629: IPR014001; KEGG: dps:DP1690 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Probable ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase.
   
 0.492
ADW17596.1
YD repeat protein; COGs: COG3209 Rhs family protein; InterPro IPR006530: IPR008454: IPR001826; KEGG: hna:Hneap_0941 YD repeat protein; PFAM: YD repeat-containing protein; Cna B domain protein; RHS protein; SPTR: YD repeat protein; TIGRFAM: YD repeat protein; PFAM: Protein of unknown function (DUF2778); RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.480
prfB
Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
  
 0.460
ADW18636.1
UspA domain-containing protein; InterPro IPR006016; KEGG: dak:DaAHT2_1379 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA; PFAM: Universal stress protein family.
       0.412
ADW18417.1
Protein of unknown function DUF82; COGs: COG1656 conserved hypothetical protein; InterPro IPR002782; KEGG: dak:DaAHT2_0168 protein of unknown function DUF82; PFAM: protein of unknown function DUF82; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF82.
  
     0.401
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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