STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18744.1COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003557: IPR017562: IPR002541; KEGG: dak:DaAHT2_2551 cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcsB; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB. (272 aa)    
Predicted Functional Partners:
ADW18113.1
COGs: COG1333 ResB protein required for cytochrome c biosynthesis; KEGG: dak:DaAHT2_0249 ResB family protein; SPTR: ResB family protein; PFAM: ResB-like family.
 
  
 0.958
ADW18743.1
COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR000343: IPR018214: IPR015895: IPR006151: IPR 015896; KEGG: dps:DP3079 glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase.
 
  
 0.902
cobA
COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366: IPR003043: IPR000878: IPR003754; KEGG: dps:DP1734 uroporphyrinogen III synthase/methyltransferase (HemD+CobA); PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA); TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
    0.894
ADW19248.1
Hypothetical protein; InterPro IPR003006; KEGG: ppd:Ppro_1255 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.822
ADW18745.1
COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: dak:DaAHT2_2550 siroheme synthase; SPTR: Siroheme synthase; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain.
       0.812
ADW18742.1
KEGG: dak:DaAHT2_0853 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.800
ADW18884.1
Hypothetical protein; InterPro IPR017871; KEGG: lpa:lpa_03456 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.638
ADW18746.1
Methyltransferase-16, putative; InterPro IPR019410; KEGG: dps:DP3082 hypothetical protein; PFAM: Methyltransferase-16, putative; SPTR: Putative uncharacterized protein; PFAM: Putative methyltransferase.
       0.607
ADW17419.1
Thioredoxin domain-containing protein; InterPro IPR017936: IPR013766; KEGG: dal:Dalk_4731 thioredoxin domain protein; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin domain protein; PFAM: Thioredoxin.
  
  
 0.585
ADW18741.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: nde:NIDE2257 putative oxidoreductase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase, Gfo/Idh/MocA family; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
       0.550
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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