Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADW18793.1H+transporting two-sector ATPase B/B' subunit; InterPro IPR002146; KEGG: dps:DP0829 ATP synthase, subunit b' (AtpX); PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: Probable ATP synthase, subunit b' (AtpX); PFAM: ATP synthase B/B' CF(0). (143 aa)    
Predicted Functional Partners:
atpH
ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
 0.995
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
 
 0.993
atpG
ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
 
 0.992
ADW18792.1
H+transporting two-sector ATPase B/B' subunit; COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146; KEGG: dps:DP0830 ATP synthase, subunit b (AtpF); PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: ATP synthase subunit b; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b.
 
 
  0.992
atpC
ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.986
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
 
 0.986
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
 0.976
ADW17434.1
COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR017710: IPR005294: IPR004100: IPR000194: IPR 000793: IPR020003; KEGG: amr:AM1_D0165 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: H(+)-transporting ATP synthase, subunit alpha; TIGRFAM: alternate F1F0 ATPase, F1 subunit alpha; ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta fam [...]
 
 0.967
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
 0.966
ADW17431.1
COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568: IPR017692; KEGG: nhl:Nhal_1908 alternate F1F0 ATPase, F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; SPTR: ATP synthase subunit a; TIGRFAM: alternate F1F0 ATPase, F0 subunit A; ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); alternate F1F0 ATPase, F0 subunit A.
  
 0.963
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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