STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18894.1Peptidoglycan-binding lysin domain protein; InterPro IPR002482: IPR018392; KEGG: nhl:Nhal_1845 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Cell division protein FtsY; PFAM: LysM domain. (304 aa)    
Predicted Functional Partners:
ADW18893.1
COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557: IPR010945: IPR001236; KEGG: dps:DP0661 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase.
       0.493
ADW17565.1
Rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR012997: IPR005132: IPR007730; KEGG: dak:DaAHT2_1328 rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; SPTR: Rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A.
  
  
 0.477
ADW17148.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665; KEGG: lif:LinJ14.1210 kinesin K39; PFAM: OmpA/MotB domain protein; SPTR: Kinesin K39, putative; PFAM: OmpA family.
  
 
 0.461
ADW17177.1
Pentapeptide repeat protein; COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cch:Cag_1224 hypothetical protein; PFAM: pentapeptide repeat protein; SPTR: Uncharacterized low-complexity proteins-like; PFAM: Pentapeptide repeats (8 copies).
   
 
 0.443
ADW17572.1
Pentapeptide repeat protein; COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: dps:DP2646 hypothetical protein; PFAM: pentapeptide repeat protein; SPTR: Putative uncharacterized protein; PFAM: Pentapeptide repeats (8 copies).
   
 
 0.443
ADW18544.1
Pentapeptide repeat protein; COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: amr:AM1_B0195 pentapeptide repeat-containing protein; PFAM: pentapeptide repeat protein; SPTR: Pentapeptide repeat family protein; PFAM: Pentapeptide repeats (8 copies).
   
 
 0.443
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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