STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18899.1Transposase IS200-family protein; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: ppd:Ppro_2857 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: Transposase IS200-family protein; PFAM: Transposase IS200 like. (143 aa)    
Predicted Functional Partners:
ADW18900.1
Hypothetical protein; KEGG: bxe:Bxe_B0006 periplasmic sensor hybrid histidine kinase; SPTR: Periplasmic sensor hybrid histidine kinase.
       0.532
ADW18897.1
KEGG: noc:Noc_0305 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2905).
       0.523
ADW18898.1
InterPro IPR000620; KEGG: pmy:Pmen_1447 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; manually curated; PFAM: EamA-like transporter family.
       0.523
ADW18901.1
COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372: IPR016160; KEGG: dak:DaAHT2_2500 DNA polymerase III delta; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta; TIGRFAM: DNA polymerase III, delta subunit.
       0.519
ADW18895.1
COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145: IPR006224; KEGG: dsa:Desal_3277 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase.
       0.467
ADW18896.1
KEGG: dba:Dbac_2665 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.467
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.