STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18935.1Metal dependent phosphohydrolase; COGs: COG1418 HD superfamily hydrolase; InterProIPR004088: IPR018111: IPR006674: IPR017705: IPR 004087: IPR003607: IPR006675; KEGG: dps:DP2870 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharact [...] (521 aa)    
Predicted Functional Partners:
ADW18934.1
COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002942: IPR002305: IPR002307: IPR001412; KEGG: dps:DP2869 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase.
       0.812
ADW16499.1
PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557: IPR019742; KEGG: dps:DP0785 hypothetical protein; PFAM: PSP1 domain protein; SPTR: Putative uncharacterized protein; PFAM: PSP1 C-terminal conserved region.
 
  
 0.758
ADW18375.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dps:DP2666 flagellar motor protein (MotB); PFAM: OmpA/MotB domain protein; SPTR: Related to flagellar motor protein (MotB); PFAM: OmpA family.
    
   0.676
ADW18376.1
COGs: COG1580 Flagellar basal body-associated protein; InterPro IPR005503; KEGG: pca:Pcar_1170 flagellar basal body-associated protein; PFAM: flagellar basal body-associated protein FliL; SPTR: Flagellar basal body-associated protein; PFAM: Flagellar basal body-associated protein FliL.
    
   0.676
ADW18542.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dat:HRM2_36690 MotB3; PFAM: OmpA/MotB domain protein; SPTR: MotB3; PFAM: OmpA family.
    
   0.516
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.