STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18953.1COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rfr:Rfer_2091 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2. (268 aa)    
Predicted Functional Partners:
pilB
Cyclic nucleotide-binding protein; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterProIPR000595: IPR007831: IPR001482: IPR003593: IPR 013374; KEGG: dps:DP2226 type IV pilus assembly protein (TapB); PFAM: type II secretion system protein E; General secretory system II protein E domain protein; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; AAA ATPase; SPTR: Probable type IV pilus assembly protein (TapB); TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; Cycli [...]
       0.773
ADW17736.1
COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: dak:DaAHT2_1077 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase.
   
 0.741
ADW18955.1
COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: cpb:Cphamn1_0392 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase.
  
 0.728
ADW17772.1
Lipopolysaccharide heptosyltransferase II; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910: IPR002201; KEGG: gme:Gmet_2345 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: Lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.
  
 0.710
ADW18305.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: geo:Geob_0641 TPR repeat-containing protein; PFAM: glycosyl transferase group 1; SPTR: TPR repeat-containing protein; PFAM: Glycosyl transferases group 1.
  
 
 0.576
ADW16510.1
Sugar transferase, PEP-CTERM system associated; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR017464: IPR003362: IPR010916; KEGG: dat:HRM2_19690 CpsE; PFAM: sugar transferase; SPTR: CpsE; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.575
ADW18954.1
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nde:NIDE3030 putative lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: ADP-heptose:LPS heptosyl transferase I; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase III, putative.
 
  
 0.571
ADW16726.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_3669 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
  
 0.486
ADW17702.1
Polysaccharide deacetylase; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR011583: IPR002509: IPR001173; KEGG: bcg:BCG9842_B1815 polysaccharide deacetylase/glycosyl transferase, group 2 family protein; PFAM: polysaccharide deacetylase; glycosyl transferase family 2; SMART: chitinase II; SPTR: Polysaccharide deacetylase; PFAM: Glycosyl hydrolases family 18; Glycosyl transferase family 2; Polysaccharide deacetylase.
  
 
 0.477
ADW16508.1
Soluble ligand binding domain protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: sus:Acid_1647 polysaccharide export protein; PFAM: Soluble ligand binding domain; polysaccharide export protein; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.473
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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