STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18971.1Protein of unknown function UPF0005; COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: dps:DP1672 hypothetical protein; PFAM: protein of unknown function UPF0005; SPTR: Conserved hypothetical membrane protein, probably cold-shock inducible; PFAM: Uncharacterised protein family UPF0005. (237 aa)    
Predicted Functional Partners:
ADW18078.1
COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569: IPR002579; KEGG: tau:Tola_0999 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase., Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase.
  
   0.701
htpX
Heat shock protein; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ppd:Ppro_3243 peptidase M48, Ste24p; PFAM: peptidase M48 Ste24p; SPTR: HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.
  
  
 0.563
ADW18970.1
DHHA2 domain protein; COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR001667: IPR004097; KEGG: dak:DaAHT2_0690 DHHA2 domain protein; PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; SPTR: DHHA2 domain protein; PFAM: DHH family; DHHA2 domain.
       0.430
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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