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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW18990.1KEGG: dvm:DvMF_2341 hypothetical protein; SPTR: Membrane protein, putative. (99 aa)    
Predicted Functional Partners:
ADW18992.1
KEGG: dvl:Dvul_2819 putative lipoprotein; SPTR: Lipoprotein, putative.
  
  
 0.803
ADW18991.1
Protein of unknown function DUF81; COGs: COG0730 permease; InterPro IPR002781; KEGG: dvl:Dvul_2818 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Membrane protein, putative; PFAM: Sulfite exporter TauE/SafE.
  
    0.746
ADW18993.1
KEGG: dvl:Dvul_2820 putative lipoprotein; SPTR: Lipoprotein, putative.
  
    0.638
ADW18994.1
KEGG: dvl:Dvul_2821 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.594
ADW18989.1
Sigma 54 interacting domain protein; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR003660: IPR003593; KEGG: dvu:DVU0151 HAMP domain/sigma-54 interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; histidine kinase HAMP region domain protein; SMART: AAA ATPase; SPTR: HAMP domain/sigma-54 interaction domain protein; PFAM: Sigma-54 interaction domain.
       0.422
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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