STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19092.1KEGG: dak:DaAHT2_2538 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1). (81 aa)    
Predicted Functional Partners:
ADW19093.1
ATP synthase I; KEGG: dak:DaAHT2_2539 ATP synthase I; SPTR: ATP synthase I; PFAM: ATP synthase I chain.
  
    0.965
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
  
 0.867
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
  
 0.692
hemL
COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814: IPR004639; KEGG: dps:DP0812 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.
  
    0.649
ADW16952.1
Preprotein translocase, SecE subunit; InterPro IPR001901: IPR005807; KEGG: dps:DP1111 preprotein translocase SecE subunit (partial length); PFAM: protein secE/sec61-gamma protein; SPTR: Related to preprotein translocase secE subunit (Partial length); TIGRFAM: preprotein translocase, SecE subunit; manually curated; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial.
  
    0.569
ADW18849.1
Peptidase M48 Ste24p; InterPro IPR019734: IPR013026: IPR001915; KEGG: dps:DP0525 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M48.
  
     0.526
ADW19096.1
Purine or other phosphorylase family 1; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: dak:DaAHT2_2542 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine and other phosphorylases, family 1; PFAM: Phosphorylase superfamily.
 
     0.482
ADW16700.1
Fibronectin type III domain protein; InterPro IPR003961; KEGG: dps:DP0434 hypothetical protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: Putative uncharacterized protein.
  
     0.462
ADW19060.1
COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195: IPR015866: IPR002314: IPR002317: IPR 018156; KEGG: dps:DP1764 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase.
   
    0.445
ADW17147.1
Protein of unknown function DUF445; COGs: COG4399 conserved hypothetical protein; InterPro IPR007383; KEGG: dps:DP2133 hypothetical protein; PFAM: protein of unknown function DUF445; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF445).
  
     0.424
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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