STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19096.1Purine or other phosphorylase family 1; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: dak:DaAHT2_2542 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine and other phosphorylases, family 1; PFAM: Phosphorylase superfamily. (239 aa)    
Predicted Functional Partners:
ADW19097.1
SSU ribosomal protein S12P methylthiotransferase; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR002792: IPR013848: IPR007197: IPR005840: IPR 020612: IPR006638: IPR005839; KEGG: dak:DaAHT2_2543 MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family [...]
       0.809
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
       0.591
ADW19079.1
Hypothetical protein; InterPro IPR000608: IPR019734; KEGG: dps:DP0803 hypothetical protein; SPTR: Putative uncharacterized protein.
    
   0.515
ADW19092.1
KEGG: dak:DaAHT2_2538 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1).
 
     0.482
ADW18914.1
Futalosine nucleosidase; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845: IPR019963; KEGG: dak:DaAHT2_0723 futalosine nucleosidase; PFAM: purine or other phosphorylase family 1; SPTR: Futalosine nucleosidase; TIGRFAM: futalosine nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: futalosine nucleosidase.
  
   
 0.471
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
  
    0.432
ADW17269.1
Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197: IPR000385; KEGG: dak:DaAHT2_0074 DNA repair photolyase-like protein; PFAM: Radical SAM domain protein; SPTR: DNA repair photolyase-like protein.
  
     0.414
ADW19093.1
ATP synthase I; KEGG: dak:DaAHT2_2539 ATP synthase I; SPTR: ATP synthase I; PFAM: ATP synthase I chain.
       0.410
ADW19311.1
Cysteine synthase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR001926: IPR015803: IPR015273: IPR005856: IPR 002308: IPR001216; KEGG: dal:Dalk_3820 cysteine synthase; PFAM: Cysteinyl-tRNA synthetase class Ia; Pyridoxal-5'-phosphate-dependent protein beta subunit; Cysteinyl-tRNA synthetase class Ia DALR; SPTR: Cysteine synthase; TIGRFAM: cysteine synthase; cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteinyl-tRNA synthetase; cysteine synthase B.
 
     0.402
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.