STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19203.1Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584: IPR017895; KEGG: maq:Maqu_1224 integrase catalytic subunit; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain. (516 aa)    
Predicted Functional Partners:
ADW19202.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR013690: IPR002611: IPR003593; KEGG: psa:PST_0581 ISPsy14, transposition helper protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; SPTR: ISPsy14, transposition helper protein; PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal.
  
 0.989
ADW19263.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611; KEGG: dak:DaAHT2_2591 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SPTR: IstB domain protein ATP-binding protein; PFAM: IstB-like ATP binding protein.
  
 0.888
ADW19204.1
Domain of unknown function DUF1738; COGs: COG4227 Antirestriction protein; InterPro IPR013610: IPR017113; KEGG: mes:Meso_3793 hypothetical protein; PFAM: domain of unknown function DUF1738; SPTR: Antirestriction protein; PFAM: Domain of unknown function (DUF1738).
       0.460
ADW19201.1
KEGG: gsu:GSU0073 outer membrane protein, putative; SPTR: Outer membrane protein, putative.
       0.449
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.