STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19209.1Plasmid-related protein; InterPro IPR002296: IPR002052; KEGG: xac:XAC2242 plasmid-related protein; SPTR: Putative uncharacterized protein; PFAM: Putative RNA methylase family UPF0020. (346 aa)    
Predicted Functional Partners:
ADW19206.1
Hypothetical protein; InterPro IPR001650; KEGG: pwa:Pecwa_1646 DEAD-like helicase; SPTR: DEAD-like helicase.
     0.927
ADW19207.1
KEGG: aav:Aave_2701 helicase domain-containing protein; SPTR: Helicase domain protein; PFAM: SNF2 family N-terminal domain.
 
     0.873
ADW19210.1
KEGG: mch:Mchl_3880 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.732
ADW16289.1
COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR000183; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
 
     0.713
ADW17449.1
TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: TRAG family protein; SPTR: DNA transfer in the process of conjugation and F pilus assembly protein; PFAM: Type IV secretion-system coupling protein DNA-binding domain.
 
     0.700
ADW16342.1
TraH family protein; InterPro IPR010927; KEGG: sat:SYN_01874 pilus assembly protein; PFAM: TraH family protein; SPTR: Pilus assembly protein; PFAM: Conjugative relaxosome accessory transposon protein.
  
     0.648
ADW16343.1
Glutaredoxin 2; InterPro IPR008554; KEGG: ppd:Ppro_0197 glutaredoxin 2; PFAM: glutaredoxin 2; SPTR: Glutaredoxin 2; PFAM: Thioredoxin.
  
 
   0.636
ADW19136.1
COGs: COG0313 methyltransferase; InterPro IPR000878: IPR018063: IPR008189; KEGG: dps:DP1634 hypothetical protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Putative uncharacterized protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family.
  
  
 0.621
ADW16349.1
Sex pilus assembly protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: sat:SYN_01865 sex pilus assembly protein; SPTR: Sex pilus assembly protein; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC.
  
     0.613
ADW16390.1
Terminase GpA; COGs: COG5525 Bacteriophage tail assembly protein; InterPro IPR008866; KEGG: dvu:DVU0194 terminase, large subunit, putative; PFAM: terminase GpA; SPTR: Terminase, large subunit, putative; PFAM: Phage terminase large subunit (GpA).
  
     0.611
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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