STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19237.1TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_5364 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein. (700 aa)    
Predicted Functional Partners:
ADW17661.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260: IPR003538; KEGG: dol:Dole_1735 TonB family protein; PFAM: TonB domain; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.872
ADW19238.1
Protein of unknown function DUF105; COGs: COG1865 conserved hypothetical protein; InterPro IPR002808; KEGG: ppd:Ppro_1265 hypothetical protein; PFAM: protein of unknown function DUF105; SPTR: Putative uncharacterized protein; PFAM: Adenosylcobinamide amidohydrolase.
 
     0.843
ADW19254.1
Protein of unknown function DUF105; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491: IPR002808; KEGG: sfu:Sfum_2743 hypothetical protein; PFAM: protein of unknown function DUF105; periplasmic binding protein; SPTR: Putative uncharacterized protein; PFAM: Periplasmic binding protein; Adenosylcobinamide amidohydrolase.
 
  
 0.821
ADW18330.1
KEGG: dma:DMR_13910 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: TolA protein; TonB family C-terminal domain.
  
 
 0.818
ADW19236.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: glo:Glov_3556 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
0.787
ADW19258.1
Protein of unknown function DUF2149; COGs: COG4744 conserved hypothetical protein; InterPro IPR018676; KEGG: ppd:Ppro_1233 hypothetical protein; PFAM: Protein of unknown function DUF2149; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2149).
  
 0.774
ADW16666.1
RNAse E; COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR004659: IPR019307; KEGG: dps:DP3008 RNAse E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Probable RNAse E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
 
 0.746
ADW19234.1
Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197: IPR000385; KEGG: ppd:Ppro_1270 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
 
     0.680
ADW19245.1
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR020322: IPR003439: IPR003593; KEGG: ppd:Ppro_1258 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
  
 0.675
ADW19246.1
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ppd:Ppro_1257 transport system permease protein; PFAM: transport system permease protein; SPTR: Transport system permease protein; PFAM: FecCD transport family.
 
  
 0.675
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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