STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19251.1COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: sat:SYN_01052 TolR protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: TolR protein; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2. (127 aa)    
Predicted Functional Partners:
ADW19252.1
Outer membrane transport energization protein ExbB; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898: IPR014172; KEGG: ppd:Ppro_1465 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; TC 2.C.1.1.1.
 
 
 0.993
ADW17659.1
Outer membrane transport energization protein ExbB; COGs: COG0811 Biopolymer transport protein; InterPro IPR014172: IPR002898; KEGG: dak:DaAHT2_0843 TonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; TC 2.C.1.1.1.
 
 
 0.974
ADW18332.1
Cell division and transport-associated protein TolQ; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898: IPR014163; KEGG: dps:DP2409 biopolymer transport protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Related to biopolymer transport protein (TolQ); TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1.
 
 
 0.943
ADW17661.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260: IPR003538; KEGG: dol:Dole_1735 TonB family protein; PFAM: TonB domain; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
 
 0.926
ADW18330.1
KEGG: dma:DMR_13910 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: TolA protein; TonB family C-terminal domain.
  
 
 0.926
ADW16666.1
RNAse E; COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR004659: IPR019307; KEGG: dps:DP3008 RNAse E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Probable RNAse E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
 
 0.867
ADW19257.1
COGs: COG0811 Biopolymer transport protein; InterPro IPR018212; KEGG: gur:Gura_0776 biopolymer transport protein-like protein; SPTR: Biopolymer transport protein-like protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
 
 0.837
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.541
ADW18375.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dps:DP2666 flagellar motor protein (MotB); PFAM: OmpA/MotB domain protein; SPTR: Related to flagellar motor protein (MotB); PFAM: OmpA family.
    
 
 0.436
ADW18521.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG2956 N-acetylglucosaminyl transferase; InterPro IPR019734: IPR013026: IPR001440; KEGG: dak:DaAHT2_1163 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat.
 
   
 0.422
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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