STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19259.1TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531: IPR007087; KEGG: ppd:Ppro_1228 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (640 aa)    
Predicted Functional Partners:
ADW19257.1
COGs: COG0811 Biopolymer transport protein; InterPro IPR018212; KEGG: gur:Gura_0776 biopolymer transport protein-like protein; SPTR: Biopolymer transport protein-like protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
   
 0.901
ADW19258.1
Protein of unknown function DUF2149; COGs: COG4744 conserved hypothetical protein; InterPro IPR018676; KEGG: ppd:Ppro_1233 hypothetical protein; PFAM: Protein of unknown function DUF2149; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2149).
 
     0.897
ADW17661.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260: IPR003538; KEGG: dol:Dole_1735 TonB family protein; PFAM: TonB domain; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 
 0.859
ADW19254.1
Protein of unknown function DUF105; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491: IPR002808; KEGG: sfu:Sfum_2743 hypothetical protein; PFAM: protein of unknown function DUF105; periplasmic binding protein; SPTR: Putative uncharacterized protein; PFAM: Periplasmic binding protein; Adenosylcobinamide amidohydrolase.
 
  
 0.812
ADW19256.1
InterPro IPR017199; KEGG: ppd:Ppro_1235 transporter-like protein; PFAM: Uncharacterised conserved protein UCP037409, membrane transporter, MTH672; SPTR: Transporter-like protein; PFAM: Predicted transporter (DUF2162).
       0.789
ADW18330.1
KEGG: dma:DMR_13910 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: TolA protein; TonB family C-terminal domain.
   
 
 0.778
ADW19255.1
Magnesium chelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672: IPR016160; KEGG: ppd:Ppro_1232 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: Putative uncharacterized protein; PFAM: CobN/Magnesium Chelatase.
 
     0.671
ADW16666.1
RNAse E; COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR004659: IPR019307; KEGG: dps:DP3008 RNAse E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Probable RNAse E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
   
 
 0.652
ADW17555.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: pca:Pcar_0454 TonB-dependent outer membrane receptor for cobalamin and Fe transport; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptor for cobalamin and Fe transport; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.629
ADW16220.1
Putative protease; COGs: COG0826 Collagenase and related protease; KEGG: dat:HRM2_21100 putative protease; SPTR: Putative protease; PFAM: Peptidase family U32.
  
     0.618
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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