STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19260.1KEGG: sfu:Sfum_3538 hypothetical protein; SPTR: Putative uncharacterized protein. (87 aa)    
Predicted Functional Partners:
ADW19261.1
ADP-glyceromanno-heptose 6-epimerase precursor; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR011912; KEGG: pca:Pcar_0024 ADP-L-glycero-D-mannoheptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase.
       0.773
ADW19256.1
InterPro IPR017199; KEGG: ppd:Ppro_1235 transporter-like protein; PFAM: Uncharacterised conserved protein UCP037409, membrane transporter, MTH672; SPTR: Transporter-like protein; PFAM: Predicted transporter (DUF2162).
       0.426
ADW19257.1
COGs: COG0811 Biopolymer transport protein; InterPro IPR018212; KEGG: gur:Gura_0776 biopolymer transport protein-like protein; SPTR: Biopolymer transport protein-like protein; PFAM: MotA/TolQ/ExbB proton channel family.
       0.426
ADW19258.1
Protein of unknown function DUF2149; COGs: COG4744 conserved hypothetical protein; InterPro IPR018676; KEGG: ppd:Ppro_1233 hypothetical protein; PFAM: Protein of unknown function DUF2149; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2149).
       0.426
ADW19259.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531: IPR007087; KEGG: ppd:Ppro_1228 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
       0.426
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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