STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19282.1preQ(0) biosynthesis protein QueC; COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR018317: IPR004479; KEGG: dak:DaAHT2_2366 ExsB protein; PFAM: Queuosine synthesis-like; SPTR: ExsB; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein. (229 aa)    
Predicted Functional Partners:
ADW17525.1
COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: dak:DaAHT2_0939 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM; PFAM: Radical SAM superfamily.
 
 
 0.997
ADW17526.1
preQ(0) biosynthesis protein QueD; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dak:DaAHT2_0938 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein.
 
  
 0.974
ADW19281.1
COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: dak:DaAHT2_2354 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: Sugar fermentation stimulation protein homolog; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein.
       0.741
ADW18310.1
Flagellar protein FlaG protein; InterPro IPR005186; KEGG: pca:Pcar_1113 uncharacterized flagellar protein FlaG; PFAM: flagellar protein FlaG protein; SPTR: Flagellar protein FlaG protein; PFAM: FlaG protein.
    
   0.676
ADW19278.1
COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576: IPR015911; KEGG: dps:DP0101 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase.
   
   0.530
ADW18915.1
COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: dak:DaAHT2_0258 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: Queuosine biosynthesis protein; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase.
 
   
 0.481
ADW19280.1
Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain protein; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020828: IPR020829: IPR020832: IPR020831: IPR 020830; KEGG: dps:DP0103 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Related to glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD b [...]
   
   0.464
ADW19279.1
COGs: COG0456 Acetyltransferase; InterPro IPR000182: IPR006464; KEGG: dps:DP0102 N-terminal acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Related to N-terminal acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase.
       0.422
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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