STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19312.1COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_1337 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase. (186 aa)    
Predicted Functional Partners:
ADW19314.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3-galactosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Alpha-D-QuiNAc alpha-1,3-galactosyltransferase; PFAM: Glycosyl transferases group 1.
  
 0.988
ADW19313.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: pol:Bpro_3986 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; manually curated; PFAM: NAD dependent epimerase/dehydratase family.
  
 0.984
ADW16733.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: dps:DP0048 lipopolysaccharide biosynthesis protein (WbpM); PFAM: polysaccharide biosynthesis protein CapD; SPTR: Related to lipopolysaccharide biosynthesis protein (WbpM); PFAM: Polysaccharide biosynthesis protein.
  
 0.942
ADW16721.1
COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR006375: IPR005835: IPR001538; KEGG: bam:Bamb_0755 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.907
ADW18777.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: dak:DaAHT2_1741 capsular exopolysaccharide family; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.867
ADW16508.1
Soluble ligand binding domain protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: sus:Acid_1647 polysaccharide export protein; PFAM: Soluble ligand binding domain; polysaccharide export protein; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.857
ADW19315.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: csa:Csal_1719 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
  
 0.799
ADW16732.1
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dol:Dole_1836 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.738
ADW16711.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020904; KEGG: bac:BamMC406_0771 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.719
ADW16712.1
GDP-mannose 4,6-dehydratase; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR001509: IPR020904; KEGG: reh:H16_A2900 GDP-D-mannose 4,6 dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-D-mannose 4,6 dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase.
  
  
 0.719
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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