STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19340.1ErfK/YbiS/YcfS/YnhG family protein; COGs: COG2989 conserved hypothetical protein; InterPro IPR002477: IPR005490; KEGG: paa:Paes_1895 peptidoglycan-binding domain 1 protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; SPTR: Peptidoglycan-binding domain 1 protein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain. (636 aa)    
Predicted Functional Partners:
ADW16748.1
Protein of unknown function DUF882; COGs: COG3108 conserved hypothetical protein; InterPro IPR017909: IPR006311: IPR010275; KEGG: pna:Pnap_3585 hypothetical protein; PFAM: protein of unknown function DUF882; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882).
 
     0.803
ADW19341.1
KEGG: jan:Jann_3110 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADW17278.1
ErfK/YbiS/YcfS/YnhG family protein; COGs: COG3034 conserved hypothetical protein; KEGG: dal:Dalk_3021 ErfK/YbiS/YcfS/YnhG family protein; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase.
  
   
 0.567
ADW19339.1
Protein of unknown function DUF107; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: dal:Dalk_3751 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: NfeD-like.
  
    0.548
ADW17759.1
Peptidase M15A; COGs: COG3108 conserved hypothetical protein; InterPro IPR013230; KEGG: sfu:Sfum_2869 hypothetical protein; PFAM: Peptidase M15A; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882).
 
     0.532
ADW19338.1
SPFH domain, Band 7 family protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107: IPR001972; KEGG: cts:Ctha_1815 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family.
       0.531
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.