STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19348.1COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: dps:DP0109 fimbrial assembly protein PilN; PFAM: Fimbrial assembly family protein; SPTR: Related to fimbrial assembly protein PilN; PFAM: Fimbrial assembly protein (PilN). (191 aa)    
Predicted Functional Partners:
ADW19347.1
COGs: COG3167 Tfp pilus assembly protein PilO; KEGG: dps:DP0110 fimbrial assembly protein PilO; SPTR: Related to fimbrial assembly protein PilO; PFAM: Pilus assembly protein, PilO.
 
 
 0.998
ADW19349.1
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: dps:DP0108 fimbrial assembly protein PilM; SPTR: Related to fimbrial assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM.
 
 
 0.998
ADW19345.1
Secretin/TonB short domain protein; InterPro IPR011662: IPR013026; KEGG: dps:DP0112 fimbrial assembly protein PilQ [precursor]; PFAM: Secretin/TonB short domain; SPTR: Related to fimbrial assembly protein PilQ [Precursor]; PFAM: Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes.
 
 
 0.997
ADW19346.1
KEGG: dps:DP0111 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pilus assembly protein, PilP.
 
  
 0.983
ADW16837.1
Fimbrial assembly family protein; InterPro IPR007813; KEGG: sat:SYN_01555 general secretory pathway protein L; PFAM: Fimbrial assembly family protein; SPTR: General secretory pathway protein L; PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L.
 
 
 0.920
ADW18341.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: dps:DP2782 type 4 fimbrial assembly protein (PilC); PFAM: Type II secretion system F domain; SPTR: Probable type 4 fimbrial assembly protein (PilC); PFAM: Bacterial type II secretion system protein F domain.
 
 
 
 0.843
ADW16843.1
General secretion pathway protein F; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR003004: IPR011850: IPR001992; KEGG: dol:Dole_1045 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F.
   
 
 0.799
ADW19344.1
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR004846: IPR001775; KEGG: dps:DP0113 type II protein secretion protein; PFAM: type II and III secretion system protein; SPTR: Related to type II protein secretion protein; manually curated; PFAM: Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL.
 
   
 0.710
ADW19395.1
KEGG: gme:Gmet_1136 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage Tail Protein X.
    
   0.689
ADW16229.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831; KEGG: dba:Dbac_2634 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
  
 
 0.678
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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