STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19352.1Transketolase domain-containing protein; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005476; KEGG: dps:DP0675 transketolase; PFAM: Transketolase domain-containing protein; SPTR: Related to transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain. (630 aa)    
Predicted Functional Partners:
ADW19071.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: dps:DP0795 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Probable ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
  
 
 0.752
ADW16706.1
Transaldolase; COGs: COG0176 Transaldolase; InterPro IPR004731: IPR001585: IPR018225; KEGG: dak:DaAHT2_2221 transaldolase; PFAM: Transaldolase; SPTR: Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
 
 0.747
ADW18156.1
COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR000276: IPR004785: IPR003500; KEGG: dak:DaAHT2_1283 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.
  
 
 0.742
ADW18816.1
COGs: COG2730 Endoglucanase; KEGG: avn:Avin_07130 glucan 1,3-beta-glucosidase; SPTR: Glucan 1,3-beta-glucosidase; PFAM: Cellulase (glycosyl hydrolase family 5).
 
     0.644
ADW18879.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: cyh:Cyan8802_0020 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase.
 
   
 0.455
ADW19072.1
COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672: IPR018189; KEGG: dak:DaAHT2_0007 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase.
  
   
 0.433
ADW19351.1
KEGG: sea:SeAg_A0021 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.423
ADW18548.1
COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dps:DP2699 geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Probable geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase.
  
    0.412
ADW18720.1
Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dps:DP1743 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Related to octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase.
  
    0.412
ADW19353.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: dak:DaAHT2_0096 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
       0.404
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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