STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19368.1ApbE family lipoprotein; COGs: COG2122 conserved hypothetical protein; InterPro IPR003374: IPR007183; KEGG: swo:Swol_1439 hypothetical protein; PFAM: ApbE family lipoprotein; SPTR: Conserved hypothetical cytosolic protein; PFAM: ApbE family. (245 aa)    
Predicted Functional Partners:
ADW19370.1
Protein of unknown function DUF39; COGs: COG1900 conserved hypothetical protein; InterPro IPR002708; KEGG: tjr:TherJR_1173 protein of unknown function DUF39; PFAM: protein of unknown function DUF39; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF39.
 
   
 0.944
ADW19369.1
NIL domain protein; InterPro IPR018449: IPR017896: IPR017900; KEGG: slp:Slip_0736 NIL domain protein; PFAM: NIL domain; SPTR: NIL domain protein; PFAM: Small subunit of acetolactate synthase; 4Fe-4S binding domain; NIL domain.
 
     0.932
ADW19371.1
Aconitase; COGs: COG1048 Aconitase A; InterPro IPR001030: IPR000573: IPR006249: IPR018136; KEGG: sth:STH3164 aconitate hydratase; PFAM: aconitate hydratase domain-containing protein; SPTR: Aconitase; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1.
       0.435
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.