STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19409.1COGs: COG4715 conserved hypothetical protein; InterPro IPR007527; KEGG: pca:Pcar_0899 hypothetical protein; SPTR: Zinc finger SWIM domain protein; PFAM: SWIM zinc finger. (646 aa)    
Predicted Functional Partners:
ADW17329.1
KEGG: gme:Gmet_1200 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lecithin:cholesterol acyltransferase.
  
     0.757
ADW16758.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR013217; KEGG: dat:HRM2_20450 two component protein (cAMP receptor domain/SAM dependent regulatory domain); PFAM: cyclic nucleotide-binding; Methyltransferase type 12; SMART: cyclic nucleotide-binding; SPTR: Two component protein (CAMP receptor domain/SAM dependent regulatory domain); PFAM: Putative lysophospholipase; Cyclic nucleotide-binding domain.
  
     0.675
ADW17406.1
KEGG: ppd:Ppro_0414 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.663
ADW19275.1
Hypothetical protein; InterPro IPR005831; KEGG: ppd:Ppro_1333 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.554
ADW17366.1
KEGG: dat:HRM2_02180 hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); SPTR: Hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
  
     0.474
ADW17331.1
InterPro IPR011600; KEGG: app:CAP2UW1_2368 peptidase C14 caspase catalytic subunit P20; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Peptidase C14 caspase catalytic subunit p20; PFAM: Caspase domain.
  
     0.466
ADW16859.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: ABC-type transporter, permease protein; PFAM: Predicted permease.
  
     0.452
ADW17759.1
Peptidase M15A; COGs: COG3108 conserved hypothetical protein; InterPro IPR013230; KEGG: sfu:Sfum_2869 hypothetical protein; PFAM: Peptidase M15A; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882).
  
     0.450
ADW16344.1
Peptidase S26, conserved region; COGs: COG4959 Type IV secretory pathway protease TraF; InterPro IPR019533; KEGG: ppd:Ppro_0246 type IV secretory protease; PFAM: Peptidase S26, conserved region; SPTR: Type IV secretory protease; PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF.
  
     0.430
ADW19410.1
COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: dak:DaAHT2_1601 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase.
       0.422
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.