STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW19437.1Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039: IPR001052: IPR018527; KEGG: cac:CA_C2778 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; PFAM: Rubredoxin. (52 aa)    
Predicted Functional Partners:
nifU
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.938
ADW17296.1
COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR017220: IPR005117: IPR006067: IPR006066; KEGG: dae:Dtox_1606 nitrite and sulphite reductase 4Fe-4S region; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
 
 0.926
ADW19438.1
COGs: COG2033 Desulfoferrodoxin; InterPro IPR004462: IPR002742: IPR004793; KEGG: dma:DMR_17610 desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; SPTR: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain.
  
  
 0.918
ADW19439.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479: IPR017936; KEGG: gsu:GSU3246 thioredoxin peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: Thioredoxin peroxidase; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
  
  
 0.642
ADW19435.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254: IPR016440; KEGG: dps:DP1647 flavoprotein; PFAM: flavodoxin/nitric oxide synthase; SPTR: Probable flavoprotein; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
 
  
 0.606
ADW17938.1
NADH ubiquinone oxidoreductase 20 kDa subunit; COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137: IPR001821; KEGG: dal:Dalk_2280 Ni,Fe-hydrogenase I small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: Ni,Fe-hydrogenase I small subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA).
  
 
 0.571
ADW19451.1
COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterProIPR019546: IPR006137: IPR001821: IPR006311: IPR 017909; KEGG: mag:amb1650 Ni,Fe-hydrogenase I small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Twin-arginine translocation pathway, signal sequence, subgroup; PRIAM: Hydrogenase (acceptor); SPTR: Ni,Fe-hydrogenase I small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA).
  
 
 0.571
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
  
 0.555
ADW16668.1
COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR007543; KEGG: dps:DP3010 organic solvent tolerance protein (OstA); PFAM: Organic solvent tolerance protein; SPTR: Related to organic solvent tolerance protein (OstA); PFAM: Organic solvent tolerance protein.
     
 0.550
ADW19440.1
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: sfu:Sfum_3251 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family.
  
  
 0.514
Your Current Organism:
Desulfobulbus propionicus
NCBI taxonomy Id: 577650
Other names: D. propionicus DSM 2032, Desulfobulbus propionicus DSM 2032, Desulfobulbus propionicus str. DSM 2032, Desulfobulbus propionicus strain DSM 2032
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