STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166655_00289Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_900166655_02325
Unannotated protein.
  
 
 0.885
GCA_900166655_00287
Unannotated protein.
 
  
 0.876
GCA_900166655_00288
Unannotated protein.
 
     0.813
GCA_900166655_00435
Unannotated protein.
  
 
 0.685
GCA_900166655_01028
Unannotated protein.
  
 
 0.685
GCA_900166655_01103
Unannotated protein.
  
 
 0.685
GCA_900166655_00391
Unannotated protein.
 
  
 0.509
GCA_900166655_00438
Unannotated protein.
 
 
 0.505
GCA_900166655_00486
Unannotated protein.
  
 
 0.495
GCA_900166655_00432
Unannotated protein.
  
 
 0.488
Your Current Organism:
Halobacillus hunanensis
NCBI taxonomy Id: 578214
Other names: DSM 21184, H. hunanensis, Halobacillus sp. JSM 071077, KCTC 13235, strain JSM 071077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.