STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166655_02850Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_900166655_03883
Unannotated protein.
 
 
 0.991
GCA_900166655_03887
Unannotated protein.
 
 0.988
GCA_900166655_02339
Unannotated protein.
  
  
 
0.931
GCA_900166655_03882
Unannotated protein.
  
  
 
0.930
GCA_900166655_03885
Unannotated protein.
 
  
 0.888
GCA_900166655_03884
Unannotated protein.
 
  
 0.680
GCA_900166655_03909
Unannotated protein.
 
  
 0.617
GCA_900166655_02851
Unannotated protein.
 
     0.606
GCA_900166655_03898
Unannotated protein.
 
  
 0.595
GCA_900166655_03222
Unannotated protein.
    
 0.581
Your Current Organism:
Halobacillus hunanensis
NCBI taxonomy Id: 578214
Other names: DSM 21184, H. hunanensis, Halobacillus sp. JSM 071077, KCTC 13235, strain JSM 071077
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.