G8B6B9_CANPC protein (Candida parapsilosis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G8B6B9_CANPC

Uncharacterized protein. (100 aa)

Predicted Functional Partners:

G8B7Z9_CANPC

0.963

G8BFL9_CANPC

0.960

G8B624_CANPC

0.912

G8B9B0_CANPC

0.906

G8B5F1_CANPC

0.888

G8B7W4_CANPC

0.869

G8B8P7_CANPC

0.869

G8B5T5_CANPC

0.841

G8BHV7_CANPC

0.808

G8B8C6_CANPC

0.798

Your Current Organism:

Candida parapsilosis

NCBI taxonomy Id: 578454
Other names: C. parapsilosis CDC317, Candida parapsilosis CDC317

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G8B5F1_CANPC	G8B624_CANPC	G8B5F1	G8B624	Lipase_3 domain-containing protein.	Autophagy-related protein 3.	0.958
G8B5F1_CANPC	G8B6B9_CANPC	G8B5F1	G8B6B9	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.888
G8B5F1_CANPC	G8B7W4_CANPC	G8B5F1	G8B7W4	Lipase_3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.963
G8B5F1_CANPC	G8B7Z9_CANPC	G8B5F1	G8B7Z9	Lipase_3 domain-containing protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.963
G8B5F1_CANPC	G8B8C6_CANPC	G8B5F1	G8B8C6	Lipase_3 domain-containing protein.	Autophagy-related protein.	0.972
G8B5F1_CANPC	G8B8P7_CANPC	G8B5F1	G8B8P7	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.771
G8B5F1_CANPC	G8B9B0_CANPC	G8B5F1	G8B9B0	Lipase_3 domain-containing protein.	Protein kinase domain-containing protein.	0.971
G8B5F1_CANPC	G8BFL9_CANPC	G8B5F1	G8BFL9	Lipase_3 domain-containing protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.961
G8B5F1_CANPC	G8BHV7_CANPC	G8B5F1	G8BHV7	Lipase_3 domain-containing protein.	Uncharacterized protein.	0.956
G8B5T5_CANPC	G8B6B9_CANPC	G8B5T5	G8B6B9	Uncharacterized protein.	Uncharacterized protein.	0.841
G8B5T5_CANPC	G8B7Z9_CANPC	G8B5T5	G8B7Z9	Uncharacterized protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.502
G8B5T5_CANPC	G8B9B0_CANPC	G8B5T5	G8B9B0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.582
G8B5T5_CANPC	G8BFL9_CANPC	G8B5T5	G8BFL9	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.432
G8B624_CANPC	G8B5F1_CANPC	G8B624	G8B5F1	Autophagy-related protein 3.	Lipase_3 domain-containing protein.	0.958
G8B624_CANPC	G8B6B9_CANPC	G8B624	G8B6B9	Autophagy-related protein 3.	Uncharacterized protein.	0.912
G8B624_CANPC	G8B7W4_CANPC	G8B624	G8B7W4	Autophagy-related protein 3.	WD_REPEATS_REGION domain-containing protein.	0.879
G8B624_CANPC	G8B7Z9_CANPC	G8B624	G8B7Z9	Autophagy-related protein 3.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.997
G8B624_CANPC	G8B8C6_CANPC	G8B624	G8B8C6	Autophagy-related protein 3.	Autophagy-related protein.	0.999
G8B624_CANPC	G8B8P7_CANPC	G8B624	G8B8P7	Autophagy-related protein 3.	Uncharacterized protein.	0.803
G8B624_CANPC	G8B9B0_CANPC	G8B624	G8B9B0	Autophagy-related protein 3.	Protein kinase domain-containing protein.	0.985