G8BJS4_CANPC protein (Candida parapsilosis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G8BJS4_CANPC

E3 ubiquitin-protein ligase. (787 aa)

Predicted Functional Partners:

G8BH59_CANPC

0.938

G8BFM9_CANPC

0.912

G8BCU7_CANPC

0.905

RPO21

0.901

G8B7L4_CANPC

0.859

G8BAH1_CANPC

0.843

G8BE79_CANPC

0.841

G8BI76_CANPC

0.841

G8BEX7_CANPC

0.825

G8BBC7_CANPC

0.794

Your Current Organism:

Candida parapsilosis

NCBI taxonomy Id: 578454
Other names: C. parapsilosis CDC317, Candida parapsilosis CDC317

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G8B7L4_CANPC	G8BBC7_CANPC	G8B7L4	G8BBC7	VWFA domain-containing protein.	Uncharacterized protein.	0.953
G8B7L4_CANPC	G8BE79_CANPC	G8B7L4	G8BE79	VWFA domain-containing protein.	RRN7-type domain-containing protein.	0.941
G8B7L4_CANPC	G8BEX7_CANPC	G8B7L4	G8BEX7	VWFA domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.695
G8B7L4_CANPC	G8BH59_CANPC	G8B7L4	G8BH59	VWFA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
G8B7L4_CANPC	G8BI76_CANPC	G8B7L4	G8BI76	VWFA domain-containing protein.	Ribosomal_L40e domain-containing protein.	0.941
G8B7L4_CANPC	G8BJS4_CANPC	G8B7L4	G8BJS4	VWFA domain-containing protein.	E3 ubiquitin-protein ligase.	0.859
G8B7L4_CANPC	RPO21	G8B7L4	G8BEH9	VWFA domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.609
G8BAH1_CANPC	G8BJS4_CANPC	G8BAH1	G8BJS4	TEA domain-containing protein.	E3 ubiquitin-protein ligase.	0.843
G8BBC7_CANPC	G8B7L4_CANPC	G8BBC7	G8B7L4	Uncharacterized protein.	VWFA domain-containing protein.	0.953
G8BBC7_CANPC	G8BE79_CANPC	G8BBC7	G8BE79	Uncharacterized protein.	RRN7-type domain-containing protein.	0.910
G8BBC7_CANPC	G8BEX7_CANPC	G8BBC7	G8BEX7	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.847
G8BBC7_CANPC	G8BH59_CANPC	G8BBC7	G8BH59	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.951
G8BBC7_CANPC	G8BI76_CANPC	G8BBC7	G8BI76	Uncharacterized protein.	Ribosomal_L40e domain-containing protein.	0.927
G8BBC7_CANPC	G8BJS4_CANPC	G8BBC7	G8BJS4	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.794
G8BBC7_CANPC	RPO21	G8BBC7	G8BEH9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.718
G8BCU7_CANPC	G8BJS4_CANPC	G8BCU7	G8BJS4	LDB19 domain-containing protein.	E3 ubiquitin-protein ligase.	0.905
G8BE79_CANPC	G8B7L4_CANPC	G8BE79	G8B7L4	RRN7-type domain-containing protein.	VWFA domain-containing protein.	0.941
G8BE79_CANPC	G8BBC7_CANPC	G8BE79	G8BBC7	RRN7-type domain-containing protein.	Uncharacterized protein.	0.910
G8BE79_CANPC	G8BEX7_CANPC	G8BE79	G8BEX7	RRN7-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.881
G8BE79_CANPC	G8BH59_CANPC	G8BE79	G8BH59	RRN7-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.990