STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PMR8_SCHCMAconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (783 aa)    
Predicted Functional Partners:
D8Q4Q3_SCHCM
Pyruvate carboxyltransferase domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 
 0.968
D8Q5E4_SCHCM
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
   
 
 
0.946
D8QDQ7_SCHCM
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.904
D8Q077_SCHCM
Isocitrate lyase.
  
 0.766
D8PMP1_SCHCM
Isocitrate lyase.
  
 0.740
D8PKL5_SCHCM
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.732
D8Q9D5_SCHCM
Uncharacterized protein.
   
 0.726
D8PZN4_SCHCM
Transket_pyr domain-containing protein.
  
 
 0.724
D8PX28_SCHCM
Citrate synthase; Belongs to the citrate synthase family.
  
 0.714
D8Q525_SCHCM
Citrate synthase; Belongs to the citrate synthase family.
  
 0.714
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.