STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PN50_SCHCMUncharacterized protein. (420 aa)    
Predicted Functional Partners:
D8Q7U8_SCHCM
RNA helicase.
    
 0.679
D8PX46_SCHCM
Uncharacterized protein.
    
 
 0.665
D8QKX0_SCHCM
U3 small nucleolar RNA-associated protein 22.
    
 
 0.665
D8PNP7_SCHCM
Uncharacterized protein.
   
   0.654
D8PLI5_SCHCM
Uncharacterized protein.
    
   0.652
D8PLW6_SCHCM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.652
D8PQG0_SCHCM
Uncharacterized protein.
    
   0.652
D8Q055_SCHCM
Sas10 domain-containing protein.
    
   0.652
D8Q3X7_SCHCM
MI domain-containing protein.
    
   0.652
D8Q6U2_SCHCM
S4 RNA-binding domain-containing protein.
    
   0.652
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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