STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PQF6_SCHCMUncharacterized protein. (324 aa)    
Predicted Functional Partners:
D8PW55_SCHCM
UBX domain-containing protein.
    
 
 0.961
D8PVP6_SCHCM
Uncharacterized protein.
    
 
 0.952
D8PRT5_SCHCM
MPN domain-containing protein.
    
 
 0.882
D8PVK9_SCHCM
RING-type domain-containing protein.
    
 
 0.840
D8QCT7_SCHCM
RING-type domain-containing protein.
    
 
 0.642
D8PR22_SCHCM
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.517
D8QF06_SCHCM
EMC1_C domain-containing protein.
    
 
 0.517
D8PL79_SCHCM
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
  
 0.476
D8PP54_SCHCM
RHOMBOID-like protein.
   
  
 0.473
D8PSJ7_SCHCM
Rab-GAP TBC domain-containing protein.
    
 
 0.471
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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