STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PQW8_SCHCMAspartate aminotransferase. (410 aa)    
Predicted Functional Partners:
D8QJZ0_SCHCM
Aminotran_1_2 domain-containing protein.
   
 
 0.989
D8QFS7_SCHCM
Malate dehydrogenase.
   
 0.988
D8QLH9_SCHCM
Malate dehydrogenase.
   
 0.988
D8PWW7_SCHCM
Aspartate aminotransferase.
  
0.978
D8PX07_SCHCM
Glutamine amidotransferase type-2 domain-containing protein.
   
 
 0.977
D8Q9X6_SCHCM
Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.
    
 0.976
D8PN59_SCHCM
Uncharacterized protein.
    
 0.969
D8QD83_SCHCM
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.968
D8PKP5_SCHCM
Uncharacterized protein.
   
 0.966
D8QDM3_SCHCM
ACT domain-containing protein.
  
 
 0.958
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.