STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PR41_SCHCMBrix domain-containing protein. (307 aa)    
Predicted Functional Partners:
D8PPR9_SCHCM
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.999
D8Q6U2_SCHCM
S4 RNA-binding domain-containing protein.
   
 0.999
D8PLI5_SCHCM
Uncharacterized protein.
   
 
 0.998
D8PN70_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
  0.998
D8PQY4_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
   0.998
D8PSR4_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
D8QHD0_SCHCM
WD_REPEATS_REGION domain-containing protein.
   
   0.998
D8QKX0_SCHCM
U3 small nucleolar RNA-associated protein 22.
   
  0.998
D8QFY7_SCHCM
BP28CT domain-containing protein.
   
  0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.997
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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