STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8PRJ4_SCHCMUncharacterized protein. (230 aa)    
Predicted Functional Partners:
D8QG57_SCHCM
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.758
D8Q903_SCHCM
Uncharacterized protein.
   
 
 0.685
D8PPR4_SCHCM
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.595
D8Q771_SCHCM
Tyrosine--tRNA ligase.
   
 0.553
D8PQE9_SCHCM
RPOLD domain-containing protein.
   
 
 0.542
D8QCE2_SCHCM
RPOLD domain-containing protein.
   
 
 0.542
D8QBE7_SCHCM
Lysine--tRNA ligase.
   
 0.503
D8QEY6_SCHCM
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.476
D8PTR9_SCHCM
Uncharacterized protein.
   
 
 0.449
D8Q5T1_SCHCM
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.449
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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